YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42524754, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGILSSLYTG VSGMTAQGEA LGVIGDNIAN ANTIGFKASR AEFQDIISKN LKGIVGGNQI  60
   61 GRGVKIGAVN PILSQGNIDA TEKVTDLAIS GDGYFKVKGS DGESYTRDGS FHFDREGYLV 120
  121 TNDNQRVQGF STDEKGNIVN KMTDIKFPRA LIPAKATKEL KLDLNLDSRM EPTKKFDPAD 180
  181 PYSTSHYSTG VEMYDSQGNK HLVSFFFNKV NDREWEFKGL VDGKEITGGE EGKMSEVAAG 240
  241 KLMFTVDGKL DSQETTSTNF NFKGGALQDQ QVKLNFGDAI KDGGKGLDGT KQYGKNSDLI 300
  301 SWHQDGAAAG TITGLSFNDE GTLTAVYSNG QANDLAQIAL AKFENPEALF KVGNNRLKES 360
  361 RDSGTASVGA PGAAGRGKLF AKSLERSTVD LATEFVNMIQ NQRGFQANAK TITTTDELLN 420
  421 EVIQLKR

Type	Start	End	Confidence
Signal Peptide	1	18	0.64
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	427	0.99