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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42523783, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQKQLPWWT WVLPFIILLG GTFVSLTFKV SQGIYWIYFP INLGVIMALW WGPRVFAAVF  60
   61 LNALVAISLF ELPRPMLYPL YALPETLEVI FSWVLVRERF KDVSAWKPSP KNISLYFVYG 120
  121 LLIPSLICSV AIQGLFVLTG IQDKSLFGWS TLITTVGDLT GAIFLTIPAL ILISPWLRKR 180
  181 NLSLFAVKPL PPTHWEVVTR KEKALFAVVL GGMLVLALSF HIPQTWYVYG ILMLLSAAWY 240
  241 GMYAALVVNT WVVFLNIILP KIANLPWSNS FLEVQTPATL LTLCFCSLIT GSAVTSLTGK 300
  301 IRELNETQGQ LKSAKDQAEE ASRAKSEFLA RMSHEIRTPL NSVLGMLELL RETQLSKDQE 360
  361 RYLTLFSHAG ENLKALINDL LDFSKIEAKA LTVENVSYNI HSTVRSVFDI LQIKAEEQGL 420
  421 HFELHISKDV PPLQWGDPTR LRQVLFNLIG NALKFTNEGS VKVKLELTKD APEQLLIEVQ 480
  481 DTGIGIPRER QSKLFSSFAQ GDPTIARKYG GTGLGLVISK NLVEIMGGTM EMKSLAGRGT 540
  541 TFKILLPHQP DFSSNIEKKA KPAMVWSQLP ADKRFRLLLV DDSEDNRVLM IHYLKSLPFD 600
  601 CDEAVNGQEA FEKFKERKYD LVFMDMQMPI MTGYKSTELI RYYEKMNKLP HTPIIALTAT 660
  661 AVVEDLQRAV SSGCDSYAVK PVKKAEILEI LAQNLTTKSP TKEAFKEPPS PSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle