YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39575630, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKSKVRTAS KGFPRAFSCD LPPPPLEYAH QGETMRIFTL IALILCTSFA WAKDTPSSFF  60
   61 DLSANSLSGK KVNFSTYRGK VVLVVNTASQ CGFTPQLKEL EEMYKKYADR GFVVLGFPSN 120
  121 DFKQEKGTND EVQTFAAKEF GVTFPLFDKA PVSGKDIQPV YQFLTTQKPG LIFKDVAWNF 180
  181 EKFLINRKGQ VVERWSSITK PSSDSITKSV EKALNEPL

Type	Start	End	Confidence
Cytoplasmic	1	33	0.49
Transmembrane Helix	34	52	0.51
Non-Cytoplasmic	53	218	0.94