YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39575518, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRHRPALCF LERGCILAAS KTVSSSQVVM TQLVLPSHTN SLGSVFGGTI MSWIDICAAI  60
   61 CSQRHCNKET VTASIDRLDF VAPVYKGWVV NLKASVNYTS RTSMEVGVRV DAENPKTGET 120
  121 FHTASAYLTF VALGSMGKPT EVPGLVLESD DDKRRFEQAK KRREIRLQNK TR

Type	Start	End	Confidence
Signal Peptide	1	25	0.63
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	172	0.89