YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42784441, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVRKAIIP AAGLGTRFLP VTKAMPKEML PIVDKPTIQY IVEEAIESGI EDIIIVTGKG  60
   61 KRAIEDHFDH SFELEQNLLE KGKYEMLEKV QASSKINIHY IRQKEPKGLG HAVWCARKFI 120
  121 GNEPFAVLLG DDIVQAETPC LRQLMDQYEE TQSSVIGVQT VPENETHRYG IIDPIEKNER 180
  181 RYQVRQFVEK PAEGTAPSNL AIMGRYVLTP EIFMFLEDQQ TGAGGEIQLT DAIQRLNEIQ 240
  241 RVFAYDFEGI RYDVGEKFGF IKTTIEMALQ NEELNVELMK YMKELVKKEE AHS

Type	Start	End	Confidence
Signal Peptide	1	24	0.76
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	293	0.99