YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42740360, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKILFWIL GIIGVLVIGG GVYAYNVYSK VSNTLNEVHK PLERDKNNKQ EEKINKSEPV  60
   61 SILLLGADER GEDKGRSDSL MVITLNPKNN SMKTVSIPRD TYTEIVGKGK SDKINHAYAF 120
  121 GGVDMSVATV EKFLNVPINY YIEVNMEGFK DIVDAVGGVD VNNDLEFSLE GKHFQKGNIH 180
  181 LNGDQALAYT RMRKEDPRGD FGRQMRQRQV MQAVIKKGAS FSSLSSYGDV LTAIQKNVKT 240
  241 NLTQDQMFDM QKNYKDCLKN SEDIQIPGDG HKAADGIWYY YVPDAAKQDL TNKLRAHLEV 300
  301 TK

Type	Start	End	Confidence
Signal Peptide	1	24	0.71
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	302	0.99