YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42740288, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVKLRVNVM IKRVFQYIIL FLTITMYASS HAGATTIPPA EHHPNTKTSS STKKIAYLTF  60
   61 DDGPNKYTTQ ILNILKEKNG KATFFVIGGK VPHYKQTMQR LIKEGHYIGL HSMSHDVKRL 120
  121 YTGDPSALIT EMEQTQNIVQ QVTKLNTHLV RVPYGSMPYL KKNYRDALVS AQYKMWDWTI 180
  181 DTYDWKSYDN PSAILERVRN QSDEQVEVIL MHDSSVTVQI LPQVIDYLQS QGYKLLPYNP 240
  241 SSHLEVNFWK DTRL

Type	Start	End	Confidence
Signal Peptide	1	32	0.47
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	254	0.99