YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42783998, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFKKLILTG ALVATTAFTS IGTAQASAGF KDVPNNHWSY KAIMDLANKN VVAGYGNGLF  60
   61 GFGDDVTREQ VAALMFRHLK PTVKEQYNNP YKDITDRSTM FKKEILALTE MGVFVGDNTG 120
  121 RFRPKDSLTR EEMAQILTRG FQLQIRGDHN FPDVDRNGWA NPAITAIKSN YITAGTGDGT 180
  181 FAPKMHVSRE QYVQFLYNAT LPFEERPGAK QPQPQPKPEV KPEVKPDPKR FANCKEANDA 240
  241 GYYDITRDSP YYGKHLDRDG DGIACEKKKK GK

Type	Start	End	Confidence
Signal Peptide	1	26	0.98
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	272	0.99