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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42739328, gi|...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKQKQQKK KTHVPFRLNV LFFCVFLMFS AVIVRLGYVQ IVRGEEYKNE VERKENSTIS  60
   61 NPVPRGKIFD RYGRPVVDNA AVRTITFTKM KGSTAEARLE TAKKLADLIE VPTDKLTDRD 120
  121 KKDYWLAIHK EEAQEKITKK DRQEFKDKKI DDKELDERQR NRVTEEEVNQ LSAKDLEVLA 180
  181 IKSKMDGGYA MTPQVIKKDA TEQEYAIISE NLAALPGVDT NVDWDRKYVY DDLFRSVLGG 240
  241 VSTSDEGLPR ERLDYYLVRD YNRNDRVGKS YLEQQYEDSL HGNKAEVRNI TDKNGNILET 300
  301 INVSKGQSGN NLNLTIDMEL QKRVEEIITK NLLRYKGGQP LLDRAFVVMM NPKNGEVLSM 360
  361 AGKQLVEENG ETKVQDFALG TMTSSYPMGS TVKGATVLTG YQTKAIQPGS YQLDEPIVLK 420
  421 GTPKKSSWKT MGSINDLTAL KMSSNVYMFK TAMNIAGVQY VRGGTLDIPQ KAFDTMRYYF 480
  481 GQFGLGVKTG IDLPNESAGQ TGKGIQPGFL LDLSIGQYDT YTPLQLAQYV STIANGGYRM 540
  541 QPQVVKEIRQ PEAKQGEVGK VVHSMEPKVL NRIDMPESQI KRVQEGFRQV FNDSGGTATK 600
  601 YFAGAPYKAA GKTGTAQTVY GGDKEIGRKA NGERKETYNL TLVGYAPLED PEVAFSVVVP 660
  661 WVDDKSGING YISRDIMDAY FDLKKVENGE ATQEEIDKKN KKQDDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle