YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42783362, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCDVERCERK NDGTMLLCGR KNELEVGFTL IEMIVCFFLL SLFFLLLPRL NFIGIENKQS  60
   61 KGLNNWEWDV FVGQVQLEFR EVSFVEKIVP ENRESMLRFR LRTGDEVTYE KLNNHLIRKV 120
  121 NMRGREVILQ NVEMVSYEVT PHLLFINVKD RSGKIYEGVA IRYSEMEINT

Type	Start	End	Confidence
Cytoplasmic	1	25	0.73
Transmembrane Helix	26	47	0.89
Non-Cytoplasmic	48	170	0.75