YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42738821, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTRILAYIC IFFLYVSAGS YSVFAQDHLY EEIQKHAKQY EIAPQNAMID KIWKATPGYN  60
   61 GRQVDMEASY NNMKKLKQFD QKHLEFKEVS PSVHLEDLSP APIYRGHPDK KMVGLTINVA 120
  121 WGNEYLPRIL EILKKHDVKA TFFLEGRWVK ENLRFAKMIV DAKQEVGNHS YTHPNMKTLS 180
  181 SDEIRDQLQK TNRMIEAATN QKVRWFAPPS GSFRDEVVKI ADDFQMGTIM WTVDTIDWKR 240
  241 PEPGVLLQRV MRKIHPGAIV LMHPTSSTTE ALDTMITKLK EQGYKVGNIT ELLDEKRVD

Type	Start	End	Confidence
Signal Peptide	1	25	0.96
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	299	0.99