YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42738491, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKIISVLVI FFMTGSIFAG GAVHAKAEGK HEWDTNKFLN IAHRGASGHA PEHTFASYDL  60
   61 VKKMKADYLE LDIQLTKDGQ LIAMHDTAVD RTTNGTGEVR DKTLSEIKSL DAGSWFNKAY 120
  121 PEKAKQEYVG QKVPTLEEIF QKYGRSMKYY IETKSPDVYP GMEEKLLALL KKYNLVGQNM 180
  181 SSSRVMIQSF SKDSLTKIHS MNKNIPLVQL LWYYPNENNE IVEWSGITHE PKRVTNEDFQ 240
  241 EIKKYAVGIG PNLRNDNGEL IIDESYMKMA RNNGLLIHPY TINEKPDMRL LMKWGATGMF 300
  301 TNYPDRLHSV LKEK

Type	Start	End	Confidence
Signal Peptide	1	25	0.96
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	314	0.99