YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42738270, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVVIKKKRT RGKRIFIWSS SIVLLLVICT AIFLNIYTLK SVPKIDGTIK LEDLQRAVTI  60
   61 KRDSKGVPHI KAENAHDLYF SQGYVQAQDR LFQMDLSRRQ ASGMLSEVVG EAAIDRDKLF 120
  121 RTLGLRRAAE ASVSQYDGEA KYALQSFADG VNAFIREAKE EKKLPVEFTI LGYEPAEWSI 180
  181 VDTLTIGKYM AFDLGGHWHG QAFRYWALKN LPKEQANELF PTYPKDAPRL LAELKNTNVD 240
  241 VAQSFAKTII PPEFNGSNNW VIGGKKSASG KPMLADDPHL SLATPSIWYQ STLEMKDLNV 300
  301 SGVIFAGVPG VILGHNDKIA WGVTNTGPDV QDLYIEKRNP NNENEFLYND KWEKATVVDE 360
  361 SIKVKGGKTI PYNVTVTRHG PVISEFADKG KAKTKTVFAL KWTALEPSAE LKAVLNMNKA 420
  421 KDWNEFETAL QDFHTPTQNF VFASNDGTIA YKANGNIPVR KKGDGSLPVP GWTDEYEWEG 480
  481 YIPYDQLPKV INPKQGFIST ANNKIVDDHY PYHISNTWAQ PYRQMRIQEF LQEKEKYTVK 540
  541 DLEELQMDQK NLYGKEFAPI FLKELNKASL NEVEKEGVKQ LTKWNFYDSK DESAPLIFHL 600
  601 LMKEISNTLF SKEIPKDVME LFEGKAQVVD ELIRKEVAGE HSAWFMKYGG FTKVVHTSYE 660
  661 NVMKKLQKEY GPDVTGWKWG DYHQLAFTHP ISKSSSMLAL LAFNREKPVP IGGSQVTVQA 720
  721 ASYGDNGIVN HGASWRFVID TKDMSNGYHI VGPGQSGHFR SNWYHDQIDD WVNGTYHTTT 780
  781 LNTEGIEGKV LNLEPK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle