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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42738018, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVLGLKMKK LLLVGTITLS MLCTESMMDD HTVEAKVKKV ERQPKNVIIM VMDGTSSSAT  60
   61 TLARLYKGKP LALDEIVTGG VRTYSAESAI TDSAPAATAL ATGNKSNSGY VGVLPTIVSS 120
  121 PGLKSIKEED KLRPVANVLE GAKRTGRATG IVATAEIQHA TPAGFSAHHV NRKHFDVIAE 180
  181 QQVYQNIDVV LGGGKAALLP IKRKDGEDLV KVIQNKGYDF IETKEALLKS KSNKMWGSFS 240
  241 HNALAFDMDR EATNPEQPTL SQMTEKAIQT LSKDKDGFFL FVEGSKPDWA AHVNDPIGMI 300
  301 SDVLAFDNAV AEALRFAKKD GNTMLIAVAD HGNSGISIGN MNTTKGYNTT PVSTYIDPLK 360
  361 KAKMTLEGTI NNLKSDISNV EEVAKLYGLD NLTYDEKERL KVVKKKIDVG PIFTTLLANR 420
  421 ANIGFTTGGH TGEDVFLYSY GPQKPVGLIQ NTDVAKTMAK AMGFNLEEVT NKLFVESELA 480
  481 FKQNGATVTV DNTNAVNPVL IVKRNNVTAQ LFVNKNIIRI KNKDYELGSV VVESNGKFYV 540
  541 PEEASRLFIK HSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle