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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42737742, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQMIKRLINK SVLLLTIIVM LSSVFSFQSV KAVSNSKTTE VIIHYKEQSG NTKDWNLWIW  60
   61 GENANGNSYE FTGEDEFGKY AKINIDGDYN RVGFIIRTNE WEKDGSDRWI ENIKDGRAEV 120
  121 WILSGDEKVY NSKPSSDLSI QKASIDSFNE ITVTTNVPFH IKERNIEIEG IKIKNISPYD 180
  181 RNSGNITNKF KIITEQKIDL KQTYKVKIEN VADTNTEIGK VIRSEEFDHS FYYGGNDLGN 240
  241 IYTPQHTKFR VWAPTASEAK LVTYKKWNDK IGTEINMQQS EKGTWKAELK GNQKGLYYTY 300
  301 KVKIGDKWIE AVDPYARAAS VNGDKGAVVD LEETNPKKWK ANKKLKFINP EDAIIYELHV 360
  361 RDLSIQPESG IKQKGKYLGV TEKGTKGPEG VKTGLDHIKD LGVTHVQFLP IFDYASVNEE 420
  421 NVNEPQYNWG YDPKNFNVPE GSYSTNPYEP TVRITELKQM IQTLHDNNLR VVMDVVYNHM 480
  481 YSATESNFHK LVPGYYYRYN EDGTFANGTG VGNDTASERK MMRKFMIDSV TYWAKEYNLD 540
  541 GFRFDLMGIH DYETMNEIRK AVNQIDPSII LHGEGWDLNT PLAAELKANQ KNAEKMKGIA 600
  601 HFNDNIRDGL KGSVFEEKEN GFINGKENME DRIKKGITAG IDYDTNSSTY QDPEQVLTYV 660
  661 EAHDNHTLWD KLELTNPSDS EEVRKQMHKL SSSILLTSQG IPFLHAGQEF MRTKYGDHNS 720
  721 YKSPDSINQM DWLRRATFNN EVDYMKGLIE LRKKYSAFRM TSAEQIKTHV SFIDAPKNTV 780
  781 AYTIEGNKNE YFTVAHNANR EAVEITLPSK GPWKALVDGK QAGSKPLYVV HDNKIKVPAL 840
  841 SSFVLKLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle