YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42737256, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQTFFKIFY LILIVIAITP RMWRLKRQVN TMSPQEKDNA VYKTTNWFGK KMVRVAGGTV  60
   61 EVKGLENVPK DKPVLVVSNH QSNMDIPVLL GYLNKPIGFV SKAEIKKFPV VPTWMELMNC 120
  121 VFMDRSDRRQ SLQAIKDGIE LLKNGHSIVI FPEGTRSKGG EIGEFKAGSF HLAVKSGVAI 180
  181 LPVTLDGTYK MFEANGNRMK RARATVTISK PITPEEYATM DIKELTKYTQ DVIASQLHK

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.56
Transmembrane Helix	6	25	0.82
Cytoplasmic	26	239	0.52