YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42737091, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRLTILSF LLIFTLIFTG CSNTKEGNAK KDGKLTVYTT IFPLADFAKK IGGDYVTVEA  60
   61 IYPPGADSHT FEPSQKQTVQ VAKADLFVYN GAELEPFAEK MEKTLQKENV KIVNASKGIE 120
  121 LRTSTEEEHH DHGDGHKEDE HHHDKDPHIW LDPTLAMKQA EKIKNALVAL QPDHKQEFEK 180
  181 NFAALQTKFT DLDDQFKAAV ANAKTKDILV SHAAYGYWEQ RYGLKQIAIA GISASDEPSQ 240
  241 KQLADITKTV KEHNLKYILF ETFSTPKVAS VIQKETGTKI LRLNHLATIS EDDAKNNKDY 300
  301 FTLMEENVNT LKEATN

Type	Start	End	Confidence
Signal Peptide	1	24	0.95
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	316	0.99