YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42781140, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFFESNIFT LIYTCLVIGL IXLFFISFTL FIRRVLQSSA AKKHHAINMN QKLDRIIELL  60
   61 EKDRNSDKRS MKRGKRMANY IKELREKVGH DYVFLNFAGG CVFNKEGEVL LQKRXDFNAW 120
  121 GFPGGAMEIG ESAAETAIRE IKEETGYDVE INELIGVYTK YFQSYPNGDK AQSIVIVFSC 180
  181 SIVGGEKRTD GDETLDLQFF PLDKMPPLFC KQHEDCLQDV LEKRVGVYR

Type	Start	End	Confidence
Cytoplasmic	1	8	0.48
Transmembrane Helix	9	32	0.91
Non-Cytoplasmic	33	229	0.52