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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42736593, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKEVKCECG HVNPIGTVFC EACGKPFESN ENTKLLDMRY EGSARRSLTQ TKTIIDKIWS  60
   61 FFSSVKVGVW LIVITLAASA IGTIFPQEMY ITPGIAPAEY YKQEYGFLGQ LYYQLGFNNL 120
  121 YGSWWYMMLI ASIGISLVIC SLDRVIPLYK ALKKQGVKRH PSFLKRQRLY GTGTPQEGDF 180
  181 EKVQKNLKKT NYNVKVEDGN VLAEKGRFSR WGPYVNHIGL IIFLFGAMLR FLPSMYVDET 240
  241 LWLRDGETKE IPGTDGQYYL KSEKFIKEVY DKSKDKEVFD EAIDRVGDKM IAKNFQTNAV 300
  301 LYKAVGEKIA GQKPKLEKVK EVEIRVNEPL KFDQFAVYQL SYRENEFKSM SFRLQNKENN 360
  361 QKWGPIKVDL TNPAEKYDLG NGYSLELLSY FPDFYFDENG RPNTKTKXPN NPAFVFKMFT 420
  421 PETPDGEVSF VGIQQNIEPD GNNKYKMSFA GVEMQNATAL TVRKDLTLWI LGIGGFIFMV 480
  481 GVIQGMYWNH RRIWIQRVND EWWIAGHTNK NWFGLKKDIE RVLEGTAIPQ PNDKVVDKKI 540
  541 S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle