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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42780518, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALVVATTL AIPFAAYSTP ALAAIKIEAN QSVAAASERT YDTEIKIYKD QKDEPSMVSQ  60
   61 YIKDPKVTIA DGKKIVTVTM QDSDYFQYLR IEDKNQPGVF HDVKVLSEDK RKNGTKVVQF 120
  121 EIGEFEKKHN MQMHILIPAI GYDHKYQVQF EIKDPTVGDK ETEKPDDNSN SGNTETDHPV 180
  181 DNQNMITDNK LRELVNKKVF NRKDLNTPIT KEELLQVKDL FLNTNEILDY SALKYMPNLK 240
  241 SLTVANAKIK DPSFFTSLKQ LKHLALRGNE FSDVTPIVKM DNLDSLDLSN NKITNVAPLI 300
  301 EMKNVKSLYL SGNQIEDVTA LAKMEQLDYL NLANNKITNV TPLSALKNVT YLTLAGNQIE 360
  361 DIKPLYSLPL KDLVLTRNKV KDLSGIEQMK QLEELWIGKN EIKDVTPLSK MTQLKQLHLP 420
  421 NNELKDITPL SSLVNLQKLD LEANYISDLT PASNLKKLVF LSFVANEIRD VRPVIELSKT 480
  481 AYINVQNQKV FLEETEVNKE VKVPIYEKDG KISTKIRLKR EGGTYSNDAV KWSTPGEKVY 540
  541 EFGVKDPFAD TGIFFTGSVI QNVVESKEDN NSKEDEKVGV VEFKDVPKGH WSEEAIHYLA 600
  601 KENIFKGYGN GQFGFGDRIT RGQVASLVQR YLKLENKVEQ KERFTDTKGH MFEQDIATVA 660
  661 QAGIMQGDGT GEFRPDGVLT RYEMSVVLYK VFQLKEDENN KVNFNDVPTG HWAEEYVKAL 720
  721 ADNNISKGDG KGNFLGDDFV TREQYAQFLY NAIMK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle