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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42736160, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPYLFVSII STLLKNFEDY IHKDTSFSNN KCTIIWKEGR CMKKVKWTLL GGLATLLLAI  60
   61 VLYKLIVLAG GYMMDEKQLV FHSSSRIVDQ KGKEITKLYV ENRDLVPIEQ IPKYVQQAFV 120
  121 AVEDSRFYEH QGIDYPSIFR ALYKDTLAGG KVEGGSTITQ QLAKNVFLTR EKTFTRKLKE 180
  181 VAISLQLEQK YTKQQILEMY MNHIYFGHGA YGIQAAAKLY FNKNVEDLTV EEGAMLAGLP 240
  241 KSPNGYSPYF SPEKSKERRD LVLSLMHKQG YLTAEESVRY QGKTIALYKN LDENELAYMP 300
  301 YIDMVIDEAA RLYGLSHQEV LRGGYTFVVP MDEKIQKVAY NQFQDARNFP GKEEGAQGAF 360
  361 LLMDNRTGGI KAAIGGRKYV PRGFNRIFAK RQPGSVLKPL IVYAPALETK KYNPYSLLTN 420
  421 ERHSFEGYEP RNYNREYSKE ITMYDAILES ANVPAVSLLN ELGVEEGKQY LEKGNVHIAD 480
  481 AGLSTALGGL KNGVSPFDLV KMYRAFLANG DIIEPHVIDK VLNRHGAVIG ESPKVETEIF 540
  541 SKQTAWYMTK MLEGVVKEGT AKAGVYNGAL AGKTGTTSLP NDDNGARDMW FVGYTPNLVG 600
  601 AVWIGYDRID KEHQLQGESA SATKLFKKIL TKANVEQKEQ FRKPEGVETI GAPIRLRKIE 660
  661 DVKMKLAFSP FGLFKAKLSW TPLPDERIMY RIYRVENGIH THVGTVKGAG EYEEKFVNIF 720
  721 SKPSFYVVPY NTQTNREGEK SKVAKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle