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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42780148, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTKLLKSIT SLSLIGGALL YTNGSDVRAA EAGVFSDVPT SHWSYPAIKD LAGKNIISGY  60
   61 GNGKFGFGDV ATREQVAALI YRALLPNKQG GTFSNDGARY VLQDGSTLNN PYRDIRSGST 120
  121 LFPEEVLTLT KLGVFNGDGN GGFRPKDSVS RAEMAQIIKN AFQVSAKQKH TFNDVPDGFW 180
  181 AEGAISAVQS NGIASGTGDG KFEPAKTVTR EQYAQFLYNA LQYKKPAVAV QDTGDAALLA 240
  241 AFKDEVQKRI NAYETNITLP YKTTNSNTKE VMNTLFNAYK EVASKNEYTN NNRSNVSYGL 300
  301 SGSPGNYTFT LKITYRETKE QTEYVMKQAK AIVSSITQVG MDDHEKVKAI HDYVVKHVSY 360
  361 DTSYKAYTAY EALVNRSAVC QGYALLTYQL LKEAGIENHF VVGTGDGQPH AWNLVKIENK 420
  421 WYHLDTTFDD PVPDEQGRVT YSYFNLSDEQ IARNHEWNRG DYPQATTNYY STLTNKIAAG 480
  481 GTKTSAYQQI LKDTKLNYLG NEYIANNYNE FKNKMQQRYN EKSPKIEILY KQSMDGALQD 540
  541 VKKAIGEIGY PQGANRVSYK AEPYNAKEGY SLVTITFM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle