YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42735939, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLFSVLAV TTLAIGIVAG CGKEEKKDTA SQDALQKIKQ SGELVIGTEG TYPPFTFHDS  60
   61 SNKLTGFDVE LAEEVAKRLG VKPVFKETQW DSLLAGLDAK RFDMVANEVG IREDRQKKYD 120
  121 FSKPYVSSSA ALVIAKDKDK PATFADVKGL KGAQSLTSNY ADIAKKNGAE IVGVEGFSQA 180
  181 AELLASGRVD FTINDKLSVL NYLETKKDAK IKIVDTEKEA SESGFLFRKG STKLVQEVDK 240
  241 ALEDMKKDGT YDKIAKKWFG ENVSK

Type	Start	End	Confidence
Signal Peptide	1	20	0.98
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	265	0.99