YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42735869, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQNPSLQEN TRSKPKKSKK KTKIIISVIL FFLIVGGGYT WFLVNKASSA VRNAAHDLAR  60
   61 GDKSDLRDKV VKPITNNVSV LVMGVDESDV RGKEYGDAIR TDALLLATFN KDSKTVKLLS 120
  121 IPRDTYTYIP VEKKKDKITH AHAYGSTKNG KDGGPQASID AVEKLLNVPV DYFVKFNFKS 180
  181 FMKIVDDLGG IEVDVPVEFT EQDSNDNADA IHLKKGVQKL NSEEALALAR TRHIDSDAMR 240
  241 GQRQQLVIEA ILKKLTSVGS VTKVGNIIDD INGQFVTNLT FDDMLSFYKY GSDSEIEKLQ 300
  301 IQGEDCYMAK GDDTCSKSAG GGRTYYYNPD KKELAKVTND LRTHLGLPAY TKTDSDSKKT 360
  361 STEKTKESKS ENSSERESSN NEVKNKNSNE DTETSSNDNE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle