YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42779881, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVNKALTIA GSDSGGGAGI QADLKTFQEL GVYGMTAITA ITAQNTLGVQ GVYPVPLEGI  60
   61 TEQLNSIGTN LTPDAVKLGM LFSSEIIQIV AEQINKFGWN NIVLDPVMIA KGGASLLQQE 120
  121 AVQALKEYLL PVATVVTPNV PEAEVLTGLE IHNVEDSKEA AKVLHELGAK YVLMKGGHAE 180
  181 YQGNEVIDLL FDGEKFIEFK SERIPSKQTH GSGCTFASAV TAGLAKGYSI EEAVQEAKQF 240
  241 ISIAIEEPLH IGSGHGPTNH FAYKLNKTSV

Type	Start	End	Confidence
Signal Peptide	1	22	0.50
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	270	0.99