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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42779818, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRKAPFKVL SSLAIAAIIG CTSVMSAPLA YAETPAKEKE NVSTTPIDYN LIQEDRLAEA  60
   61 LKERGTINPA SSKEETKKAV EKYIEKKQGD QANKEIFPAD TAKEASDFVK KVKEKKMEEK 120
  121 EKVKKPEKNV SPEQKPEPNK KQLNGQVPTS KAKQAPYKGS VRTDKVLVLL VEFSDYKHNN 180
  181 IDQTPGYMYS KDFSREHYQK MLFGNEPYTL FDGSKVKTFK QYYEEQSGGS YTTDGYVTEW 240
  241 LTVPGKASDY GADGSSGHDN KGPKGARDLV KEALHAAAEK GLDLSQFDQF DRYDTNGDGN 300
  301 QNEPDGVIDH LMVIHAGVGQ EAGGGKLGDD AIWSHRSKLA IDPVAIEGTK SKVDYFGGKV 360
  361 AAHDYTIEPE DGAVGVFAHE FGHDLGLPDE YDTKYTGTGS PVEAWSLMSG GSWTGKIAGT 420
  421 EPTSFSPQNK DFLQKNMGGN WAKILEVDYD NIKRGVGVPT YIDQSVTKSN RPGVVRVNLP 480
  481 GKSVETIKPE FGKHAYYSTR GDDMHTTLET PFFDLTKGTN AKFDYKANYE LEAECDFVEV 540
  541 HAVTEDGTKT LIDRLGEKVV QGDKDTTDGK WIDKSYDLSQ FKGKKVKLQF DYITDPAVTY 600
  601 KGFAMDNVNV TVDGQVVFSD DAEGTPNMQL NGFVVSDGTE KKAHYYYLEW RNYAGSDNGL 660
  661 KAGKGPVYNT GLVVWYADDS FKDNWVGEHP GEGFLGVVDS HPEALVGNLN GKPTYGNTGM 720
  721 QIADAAFSFD QTPAWSVNSL TRGQFNYSGL QGVTTFDDSK VYSNKQIADA GRKVPNLGLK 780
  781 FQVVGQAEDK SAGAVWIKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle