YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42735719, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKPKLYKVL STLAASTLLL SACGGADSGS KKANTKKVET NKFSAAVKND GKEIKDGSLT  60
   61 YGLVSNSPFA GVLSRVLYEV APDSEIMDFF DEQLLATDKN WEITNDGAAT YTISEDKKTI 120
  121 TIKIKDNVKW HDGNPVTAED LEYSYLIIGN SKYTGIRYDT QMQMIEGMEE YHAGKADKIS 180
  181 GIKVVDPKTI SITYKEVNPS LKTGIWTYPT PKKYLGDVPI EKLAESDKIR QNPIGFGPFK 240
  241 VKKIVPGESV EYERFDDYWG GKPKLKNVTL KVVNPSIVSA SLKKGDIDIA AITADQYPNV 300
  301 SKLKNTQLIG KTDLAYTYIG FKFGHMDKAK NEAVMDNDKF KDVRLRQAMA YAIDREKLGE 360
  361 KVYHGLRVPA NSPIPPSMPK YHNNNVGAYN LDVDKAKKLL DEAGYKDKNG DGFREDPKGN 420
  421 EFKINFLASN GSETSEPLAK FYIQSWKDIG LKVELVDGRL HEFNAMREMI KKDDPKVDIF 480
  481 SGAWNTGSDP DLSGLWGKNA GFNYQRWVND ENTKLLDAGL SEKATDEKYR KEVYDKWQKL 540
  541 IHDEAPMIPI HYTFDLTGVN KRVKNYDVNT EVNQITSHWK DVTVTSEKPE VEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle