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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42779295, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKVVPVVA SVLGASLLLT ACGGNKDHAS GAKANDKAPD KQAINLSFAS EIPTMDVAKA  60
   61 TDGESMSVMR NVFEGLYAMG EDNKPIPGVA ESVDVSPDKT KYTFHLRDSK WSNGTPVTAK 120
  121 DFVFAWQRAV NPDTAAEYAF LFFDIQNAKQ INQKQLPVDQ LGIKAVDDKT LEVQLDRPVP 180
  181 YFLSLTTFST FLPINEEYLK SQGDKYGLET NHLIYNGAFT LDNWKHEQSF QLKKNPNYWD 240
  241 AKTVKLEEIN FNVVKDKSTE INLYDSGQID RVALDAEFVD KYKGDPNFKE RAEVGIQFLR 300
  301 LNQKNETLKN QHARLAINGA MNKKAYVETI LNNGAVPAEG MVPAKFAKSP EGNDFRKENG 360
  361 NLVKDDVKTA KENWKKAKQE LGTDKVTIEL LTSDNALAKK TGEYLKGELE KNLDGLTVNL 420
  421 KPQPRKQQLK LLLSGDYEIG IDGWGPDFAD PITFLDLFTT DSAYNFDKYS NKEYDELIHK 480
  481 VKTDLAGDEK ARWEAMKQAE KILLQDGAVA PLYQQGRSYL QRGFIKGLVT TDFGGEFNYK 540
  541 WTEVAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle