YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32409347, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSQRRMRAL LYIALAGFIT LLFFTSRARH AQEPDPRSIQ DFYHKTKSAM EGSRIGGGSR  60
   61 RGQAVVGTQK VEFDEDDAIV AKAMQERLRK AEQMAKSNAN AKAPNKPDDP EAVVGVGSSA 120
  121 HGQNHLGKGD SVETEEHHAI LEELRSILKK SPIIIFSKSY CPYSKKAKSL LLGDYQIDPA 180
  181 PYVVELDQHP LGPGIQAELG DRTGRKTVPN ILVGGISIGG SDDIAKLDQE ETLIEKIMSL 240
  241 AGKRLTVTKH SKSN

Type	Start	End	Confidence
Signal Peptide	1	28	0.93
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	254	0.99