YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28926963, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQVPVQTIH RDPQLFYWIL FPITIVMILT GVLRHYASVL MQSAPKKLDQ KAIREQRSLL  60
   61 HGINLRGNFH ALSKKSFATR RDALVTAFES GAYLKDPERA GQGQPNPLSD PSSMEGMMGM 120
  121 MKNQMAMIIP NTLIMSWINA FFSGYVIMKL PFPLTIKFKS MLQAGVMTKD MDPRWMSSIS 180
  181 WYFLCIFGLQ SVFNFLLGSD NAASQMAQQM GGMGAAPQMF GPGVDPDKQF KAEAENLAVI 240
  241 EHYSVLDNVE ERLLEGITV

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.83
Transmembrane Helix	15	37	0.91
Cytoplasmic	38	126	0.84
Transmembrane Helix	127	148	0.89
Non-Cytoplasmic	149	178	0.79
Transmembrane Helix	179	198	0.93
Cytoplasmic	199	259	0.82