YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85116983
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALRSSSAR VFAAASRPAF RPVVAARGMA NLADGATQSQ QASSEQSPKL KTFQIYRWNP  60
   61 DTPTEKPRMQ SYTLDLNKTG PMVLDALVRI KNELDPTLTF RRSCREGICG SCAMNINGTN 120
  121 TLACLCRIPA DNSAEMKIYP LPHTYVVKDL VPDLTLFYKQ YKSIKPYLQR DTPSPDGKEY 180
  181 RQSKADRKKL DGLYECILCA CCSTSCPSYW WNSEEYLGPA ILLQSYRWLA DSRDERTAER 240
  241 KDALNNSMSL YRCHTILNCT RTCPKGLNPG LAIANIKKEL AF

Type	Start	End	Confidence
Signal Peptide	1	25	0.92
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	282	0.99