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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85115080
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLPFRDINV QAASDSYIFT SPSSPNAPAL TIDRPTGDIR LSDASLLAGK RVARVSSIAG  60
   61 ILGVVRLRLD KYIIVITKAQ PVGRLRGHMV YKVVATEFLP LRERQIHDHD EDKFLNLLKG 120
  121 FIKSGPMYFS YSLDVTNTSQ RQAQHDLSTP LWQRADDRFF WNRFLQSDLI NFRTKGGRGS 180
  181 PAPQPGIDPY ILPVIFGMFE IHPTTFKGTP ITIALITRRS RHRAGTRYFS RGIDAEGHAS 240
  241 NYNETEQIVV LNDRGSGLGG FTGSGDMQSG KLGGSDGKEM QVLSYVQTRG SVPVYWAEVN 300
  301 NLKYTPTIQL KSTEAAFPAA KAHFDEQIRL YGDNYLVNLV NQKGRETRVK LAYEQMVDRL 360
  361 VSSPKERVQS DALTDEKFHT IETSTKPQTS FDRLHYIYFD FHAETKGLQM HRAQLLIDRM 420
  421 HEALIAQQYF RAVDSPASQV NGGRLEVRNL QTSVVRTNCM DCLDRTNVVQ SMLARWTLDR 480
  481 MFIDLGLMAR GSQFKDEDPA FEFMFRNMWA DNADIVSNSY AGTGAMKTDL TRTGKRTKAG 540
  541 ALADANIAVT RYCKNNFFDG PRQDAFDLFL GVYQPGAANI GSQLVFVDRR PVLIQAIPYL 600
  601 AAFSLFFVFV GMWTPRLPDS AVWPMRLFII FWTAVAAWSL TFIISNGMLY VNWPKLVPRP 660
  661 WAVEGYHETI TKVVRKDKIL GPLVAKHERG LSTARYINAE EGLG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle