YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85115788
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWILPLVGYL GSIAGFCFLT LAIASGLYYL SEVVEEHTVV AKRFLTRLIY TIIVIQLLLC  60
   61 LVDRFPFFLT LLSVGSHVVY LGNMRRFPYV KLTDPLFVLS CGLVLVNHYL WFKHFSRHQE 120
  121 RAYQNMTSYY DMPSNVPTFT EIASYFGICV WLVPFALFVS LSASDNVLPT MGNDASSSGG 180
  181 AGGVGGDGTR ARRGQGLIKS VVDNILGAVG GVTSTVGWKK SDDRL

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.79
Transmembrane Helix	7	30	0.91
Cytoplasmic	31	47	0.69
Transmembrane Helix	48	72	0.80
Non-Cytoplasmic	73	91	0.60
Transmembrane Helix	92	112	0.89
Cytoplasmic	113	141	0.60
Transmembrane Helix	142	163	0.80
Non-Cytoplasmic	164	225	0.46