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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28926332, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIASSLLPSR FRGEQPATQA ATPSWINKKV TPPLQKLSKI TSSNPIHTIV LVALLASSSY  60
   61 IGLLQNSLFN VTRSVRKAEW ESLQAGSRML RAGANTEWNW QNHDPEAPVP ANANHLALLT 120
  121 LVFPDTAESG PVVAQTNTVP IPSNLSITPL PSTAISFTYS QDSALAFSLP YSQAPEFLAN 180
  181 AQEIPNAVSS QETIETERGH EKKMWIMKAA RVQTRSSIVK WVQNAWVEFT DLLRNAETLD 240
  241 IIIMALGYIS MHLTFVSLFL SMRRMGSNFW LATSVIFSSI FAFLFGLLVT TKLGVPMNMV 300
  301 LLSEGLPFLV VTIGFEKNIV LTRAVLSHAI DHRRPTEKSG KPSKQADSAH SIQSAIQLAI 360
  361 KEKGFDIVKD YAIEAGILVL GAASGVQGGL QQFCFLAAWI LFFDCILLFS FYTAILCIKL 420
  421 EINRIKRHVQ MRKALEEDGV SRRVAEKVAQ SNDWPRADGK DQPGTTIFGR QLKSTHIPKF 480
  481 KVMMVTGFVL INVLNLCTIP FRSANSISSI SSWARGLGGV VTPPPVDPFK VASNGLDIIL 540
  541 EAARADGRET IVTVLTPIRY ELEYPSIHYD LPQKSAEVEG GDYANLGGYG GRMVGSILKS 600
  601 LEDPILSKWI VVALALSVAL NGYLFNAARW GIKDPNVPDH PINPKELDEA QKFNDTASAT 660
  661 LPLGEYMKPT APSSPVAPLT PSSTDDENDA QAKENRAVTL AAQRATTIRS QGELDKMLAE 720
  721 KRTHELNDEE IVHLSLKGKI PGYALEKTLK DFTRAVKVRR SIISRTKATT ELTNILDRSK 780
  781 LPYQNYNWAQ VHGACCENVI GYMPLPVGVA GPLVIDGQSF FVPMATTEGV LVASTSRGCK 840
  841 AINSGGGAVT VLTADGMTRG PCVQFETLER AGAAKLWLDS EKGQSIMKKA FNSTSRFARL 900
  901 ETMKTAMAGT NLYIRFKTTT GDAMGMNMIS KGVEHALSVM YNEGFEDMNI VSLSGNYCTD 960
  961 KKAAAINWID GRGKSVVAEA IIPADVVKNV LKTDVDTLVE LNVNKNLIGS AMAGSMGGFN1020
 1021 AHAANIVAAI FLATGQDPAQ VVESANCITL MRNLRGNLQI SVSMPSIEVG TLGGGTILEP1080
 1081 QSAMLDMLGV RGPHPTNPGE NARRLARIVA AAVLAGELSL CSALAAGHLV KAHMAHNRSA1140
 1141 PPTRTSTPAP AAAAGLTMTS SNPNAAAVER SRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle