YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32408687, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFALVSRRS ALTFGRRAVR FESTTSEKAT EAAKKTAAKA SEGLSRVSSA AGPVLAKYAK  60
   61 TLQSTLGRVG GRTGKLIAFA ERQTPFVIYY SKVAAELGRI VFRGQSMTPP YVPSSAPRLP 120
  121 MLGNLWVVDM PLHHSSVSTF KAYFQNFVKS VQSGSFFSNA GASLQNVRNI SRTQVAAAGV 180
  181 LLAECLGFFT IGEMIGRMKL IGYHGETHAA AH

Type	Start	End	Confidence
Non-Cytoplasmic	1	174	0.74
Transmembrane Helix	175	195	0.61
Cytoplasmic	196	212	0.44