YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COX16_NEUCR
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFQSKKFPS TANTNTFAAK YRAMMKKHPF LLFGLPFMSV IVAGSFILTP AAAIRYEKYD  60
   61 RKVRQVSREE ELGLGQRKRR VDIREEYYRL AAKDLDNWEQ KRVERLKGES DGLL

Type	Start	End	Confidence
Cytoplasmic	1	29	0.56
Transmembrane Helix	30	54	0.69
Non-Cytoplasmic	55	114	0.78