YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41399275, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQPLRKKGG LGRGLASLIP TGPAEGDAGP ATLGPRMGDA AADVLIGGPA PQEASPVGAV  60
   61 YREISPADIE RNPRQPRQVF DEEALAELVH SIREFGLLQP IVVRAIKESA SGARYQIVMG 120
  121 ERRWRAAQEA GLATIPAIVR ETGDDNLLRD ALLENIHRVQ LNPLEEAAAY QQLLDEFGVT 180
  181 HDELAARIGR SRPLITNMIR LLKLPIAVQR RVAAGVLSAG HARALLSLEA GPEAQEELAT 240
  241 RIVAEGLSVR ATEEAVTLAN RAGTTTPTPP RRKPIQMPGL QDVADRLSTA FDTRVTVSLG 300
  301 KRKGKIVVEF GSVDDLQRII DVMAPPKP

Type	Start	End	Confidence
Signal Peptide	1	26	0.92
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	328	0.99