YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41395440, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAKPDPKRR SPASRPGKAG DSVRRRRAAK PSQTVTARKT ARARHEPAAE PIVRQAAESV  60
   61 EQRSEQRLGF TARRAAVLAA VICVLTLTIA GPVRTYFAQR TEMNQLAASE AALRRQIADL 120
  121 EQRKAKLADP AYIAAQARER LGFVKPGDIP FQVQLPPTAA EPTQPGSPSA KPVNNDPWYT 180
  181 SLWHTIADAP HLPPANPAVP QAPPAEPGPP GPVPPPAPNP AGPGG

Type	Start	End	Confidence
Cytoplasmic	1	74	0.87
Transmembrane Helix	75	93	0.89
Non-Cytoplasmic	94	225	0.93