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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41406546, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRKNVIRTI TAIAVVVLLG WSFFYFSDDT RGYKPVDTSV AMAQINGDNV KSAQIDDREQ  60
   61 QLRLTLKKGN GDTDNSDKVI TKYPSGYAVD LFNALSAKNA KVSTVVNQGS ILGELLVYVL 120
  121 PLLLLVGLFV MFSRMQGGAR MGFGFGKSRA KQLSKDMPKT TFADVAGVDE AVEELYEIKD 180
  181 FLQNPGRYQA LGAKIPKGVL LYGPPGTGKT LLARAVAGEA GVPFFTISGS DFVEMFVGVG 240
  241 ASRVRDLFDQ AKQNNPCIIF VDEIDAVGRQ RGAGLGGGHD EREQTLNQLL VEMDGFDPRA 300
  301 GVILIAATNR PDILDPALLR PGRFDRQIPV SNPDLAGRRA VLAVHSKGKP IAPDADLDGL 360
  361 AKRTVGMTGA DLANVINEAA LLTARENGTV ITSAALEEAV DRVIGGPRRK GRIISEQEKK 420
  421 ITAYHEGGHT LAAWAMPDIE PIYKVTILAR GRTGGHAVAV PEEDKGLRTR SEMIAQLVFA 480
  481 MGGRAAEELV FREPTTGAVS DIEQATKIAR AMVTEFGMSS KLGAVKYGSE HGDPFLGRTM 540
  541 GTQADYSHEV ARDIDDEIRK LIEAAHTEAW EILTEYRDIL DTLAGQLLEK ETLHRAELES 600
  601 IFAGVEKRPR LTMFDDFGGR IPSDKPPIKT PGELAIERGE PWPPPAPEPA FKAAIARASE 660
  661 AAAAARLEAD RNANGGNGSH ANQGGNRQGP TQPDYGAPAG WRAPGWPPQQ SQQPNYWHPP 720
  721 AQPPYWQQPA HGYPGQQPYP GQQPYPGQPG GPAQSGPPQA RPPYPPYPPY PPPGQPAPEG 780
  781 GSPDRQDDDV SRSNPPAHG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle