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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39998512, gi|...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVSLTNED ARLGADTLRM LAVDAVEAAA SGHPGLPMGA ADYAFLLWHS HLRFDPADPE  60
   61 WPGRDRFILS AGHGSMLLYG LLHLFGFDLP LDELKRFRQW GSRTPGHPEY GHTPGVEVTT 120
  121 GPLGQGFAMG VGMALAARMG SARFADERFD PCAHHIYALV SDGDLMEGVS QEAASLAGHL 180
  181 KLGNLVYLYD DNRITIEGST DLAFSEDTAG RFAALGWHVQ AVDGHDVRQV DEALWRARVE 240
  241 RERPSLIIAR THIAQGSPGK HDSAAAHGSP LGAEEAAATR RSLGWPDELF HVPERIRELC 300
  301 EQRREALAEA RAAWQDELRR WRRRNSDKGR LWDLMAEKGV PRDLESRLLA AVGAEAGATR 360
  361 SLAGKVLQAA AAVVPSLVGG SADLEPSTNT RIKDSSSVLP GSYGGRNLHF GVREHAMAAI 420
  421 MNGMARHGGF IPYGATFLVF ADYCRPAIRL AALMKQQAVY VFTHDSLFVG EDGPTHQPVE 480
  481 QLSSLRLIPN LRVIRPADGP ETALAWAAAL RRTDGPTALV LTRQKVPAIA REETLDPRTF 540
  541 AKGGYVVRSG GAAPAVVLMA SGSEVGLALA AAEIMAGNGV AARVVSIPCM EAFLAQPESY 600
  601 RRRCLPGRVP RVAVEAGHGG LWWRLLGPAG LFIGLETFGA SAPEKVLAEQ YGFTPELVAR 660
  661 RVAEFVER

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle