YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39985456, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTSLSLRKR LKWHLGVFAA IVATLPVLLL PAPVAVALGG AAGSLAFRLL GKVRRNTVTN  60
   61 IRNALPALQS MEGWDPAAGT PEEIARRTFV NLGRTAVEII KLCYGQGQGL VEGTELRGME 120
  121 HYLRAKERGK GVIFITGHCD NWEIVAHAFG THSDGMAVVA RRQKYEPLTR LLERLRNRHG 180
  181 NSVIYADGAA RQIFFRLRKN GAIGLLMDQA VHPSEGELVE FLGKKAWTTT MPALLAAKTG 240
  241 AALVPGFGRR EGNRHVLEFF PEIAPDPAGD PIATTRLLNR AIEAYIVRHP DQWLWVYNRW 300
  301 KRVPAEQ

Type	Start	End	Confidence
Signal Peptide	1	37	0.94
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	307	0.98