YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39998411, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKAYLRAED TFRPVAVESD ELAELDTDTL VWLDLMSPTT EELATVERCL KLELPTRQES  60
   61 EEIEFSSRYW EDETGIDINT YFLVKQDDKY HNETVSFILK RHFIVTIRFS DHRIFTEFSR 120
  121 RLRLNPRAFR DGADILNGIL AMRVDMDADI LEALSKSIAS IGRKEPQSFD NPTTFLEYIT 180
  181 DYEDINITIR ENLTDKHRVL SSLLKSTMIS EPLKKEFSMM MKDVNSLIIS ANFNFERLDY 240
  241 LQNLFLNHMS VEQNKVIKIF TVMSVIFLPP TMIASIYGMN YKHMPELEWV FGYPFALSLI 300
  301 VLSAVLPLYI FKKKGWL

Type	Start	End	Confidence
Cytoplasmic	1	255	0.95
Transmembrane Helix	256	278	0.89
Non-Cytoplasmic	279	289	0.84
Transmembrane Helix	290	311	0.94
Cytoplasmic	312	317	0.92