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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39998244, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRSMKRWA VVTALAATAA VAAAGAGCAP KKVEQAGRVA IPDGTIDPAE WGKAYPVHYD  60
   61 LWKKTEEPTV AGKSRYKKGY DDDGVFYDKL DEFPFLALLY NGWGFGVEYK EPRGHAHMVR 120
  121 DQFEVDPGRV KAGGSCLTCK TPYAPALQQR LGKDYFSKPY KEVHAQIPKE HQMLGVACID 180
  181 CHNNNDLSLK VSRGFTLGKA LEKLGVDQEK LSTQDKRTLV CAQCHVTYSI PKDENMKSTD 240
  241 VFFPWDGSSY GGITIENIIA KLRSNPANRE WTQGVTGFKL AFIRHPEFEL FSNNSVHWQA 300
  301 GVACSDCHMP YTKVGTRKVS DHRVMSPLKN DLKACQQCHA ESPEWLRNQV YAIQDRTMSQ 360
  361 FIRAGYATAT VAKLFEMAHK AQAEGKQIDK ALYDQARDHY EEAFYRVVFI GAENSIGFHN 420
  421 PTEALRITGD AAAHAGKAEG FLRQALAKAG VTVPLKVDLE LAKYTNNRGV KKLMFKAEHE 480
  481 IKDPLAAKEK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle