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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39998223, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIVAITSIC LAVAALLALG GYLFYLMATL PKVDRLADYK PPIVSQVFGD DGSLVGEFYL  60
   61 ERRTVVPVEK LPRRLVQAFV SAEDSNFYQH KGLDYVGIVR AAVKNLISLR KKEGASTITQ 120
  121 QVAKSMLLTP EKSYTRKLKE AVLAKRMEER LSKDDILYIY LNQIYLGAGS YGVQVAAETY 180
  181 FGKNVEQLNL AEMAMLAGLP KAPNAYSPIK HLDRARERQA YVLERMVKEG YVTQAEADHA 240
  241 RATPIVIQSM KKVNSEQSAY FLEHIRIALE DRYGEEQLYK EGLRIYTTMN AEMQKAAYEA 300
  301 VVNGLKNVDK RQGFRGATAY LAEAAVAAVC DKVEDGIDTV SLKQGATYQG VVTAVDPVRG 360
  361 DVTVRVGDRT GTLSRKNMAW AGKVQLVNAW GKQEVKGKFL SLGSVILVSV VTPDADKKGA 420
  421 VFALDQEPEA QAAVVALDPL SGAVKAMVGG YDFRKSQFNR ALQAKRNPGS AFKPLIYAAA 480
  481 LDKGITPATI FDDSPVEYES GKEKAWKPKN YDNIYRGNVT MREALTNSIN VVSVKILEQI 540
  541 GVDYAIEYAK KLGITSPLSA NLTLALGSSS LTPLELTSAY AVFASGGYRT TPYFVTRVED 600
  601 AEGRTLEETA PPVIPRFSVM TSAESSPLEA SPAPPATAGD SASTAVPVIA PETAYIMTNL 660
  661 MESVVQSGTG QRARAVGRPV AGKTGTTNDM KDAWFVGYIP QLVAGVWVGY DQERSLGAGG 720
  721 SGGQAAAPIW TEFMRRAVAG IPSRDFETPP NVTFATINPR TGRLAREGSD GAVQECFIAG 780
  781 TEPTAYDGES SEDGVP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle