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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39998165, gi|...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYDAEKWIT LRIRFIGGFF VLFFSLVVCR AFYLQVVKRD HLLKLADRQH QKIVPLTPAR  60
   61 GTIYDANGSA LAVSVEMDSC FAEPKSIADL DDAAARLSPV LGFPKETLLR KLQGNKNFVW 120
  121 LQRRLTPDVV KRIRALNIDG IGFVKETKRF YPNSEVAAHV IGFTGVDPEG LEGIELRYDS 180
  181 TILGGTGYLV TERDALGRDV ALKGTVIQDG AMGHNVVLTL DKNIQYIAEK ELAKAVDGSG 240
  241 ARAGTAIVMD PHTGRVLAMA NYPTFNLNAH GAYHQSLWRN RAVADSYEPG STFKVFLIAS 300
  301 ALEEKVIRPG DRINCEGGSF SIGGRTIHDT HKYGSLSIPE ILKYSSNIGS AKIGSRLGAS 360
  361 RLYSYLRNFG FGARTGIDLP GEAGGTLRDW NQWYGIDLAT VSFGQGVTAS SIQLAAAFSA 420
  421 IANGGTLMKP YLVERVVDSE GNVIKSSSPQ PLRRVVSETT AKNVARMMEG VAVEGGTGTN 480
  481 AAVEGFRVAG KTGTAQKVDP VTRGYSLTKR TASFIGFVPA DRPRLTILVM VDEPKTSPYG 540
  541 GVVAAPAFSS IALQSLCYLK VPPDGIVRSK PKVVEAKADQ PTGDDLSAAE GEIVDAGEGV 600
  601 VMPNFRGMSM RQALKTMEER GINVRLMGSG RAVEQSPLPG HRVGPSDQVW VKFVPSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle