YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MRAY_GEOSL
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.94
Transmembrane Helix	21	45	0.87
Cytoplasmic	46	69	0.88
Transmembrane Helix	70	90	0.90
Non-Cytoplasmic	91	96	0.79
Transmembrane Helix	97	114	0.93
Cytoplasmic	115	134	0.87
Transmembrane Helix	135	155	0.94
Non-Cytoplasmic	156	169	0.87
Transmembrane Helix	170	191	0.88
Cytoplasmic	192	197	0.81
Transmembrane Helix	198	218	0.93
Non-Cytoplasmic	219	232	0.83
Transmembrane Helix	233	254	0.93
Cytoplasmic	255	260	0.84
Transmembrane Helix	261	281	0.93
Non-Cytoplasmic	282	286	0.81
Transmembrane Helix	287	309	0.92
Cytoplasmic	310	335	0.92
Transmembrane Helix	336	355	0.93
Non-Cytoplasmic	356	358	0.70

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYHLLYPLA ADFRIFNVFK YLTFRTIYAV ITALVVSFIL GPWVIRKLEA LQARQVIRTD  60
   61 GPESHLKKSG TPTMGGILIL ASIVIPTLLW ADLTNRYVWT TLFVILGYGL IGFTDDYKKV 120
  121 VEKDTKGLSP RQKMFWQMLI AGGAVCFLVL VAGMSTELSV PFFKRLHPDL SYLYIPFGML 180
  181 VVVGASNAVN LTDGLDGLAI GPVAINAATF LLFAYIAGNA KLSSYLQTPY VPGAGELAVL 240
  241 CGAMVGAGIG FLWYNAYPAE VFMGDVGSLS LGGGLGILAV ITKQEMLLVI VGGIFVVEAL 300
  301 SVIFQVGSYK YRGKRIFRMA PIHHHFELKG VAEPKIIVRF WIITIILALV AISTLKLR