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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39985098, gi|...
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKGILNKFA VIAGTKKAGP PAGEERTVIA PIKEISGKAV HCSQAVKKAE EYLLALQNPE  60
   61 GYWVFELEAD VTIPSEYIML QRFLGREISP ELGKRLENYL LDRQLPDGGW PLYAEDGFAN 120
  121 ISATVKAYLA LKVLGHSPQA PHMIRARLMV LSLGGAARCN VFTRILLALF GQIPWHTPPA 180
  181 MPVEIVLLPQ WFFFHLSKVS YWSRTVIVPL LLLYAKQPVC RLRPEEGIPE LFSTPPDKLR 240
  241 HLDGFQPGYW RKNAFIIFDR LLKRFNRFIP SALHRKAIAE AEQWTRSHMQ GSGGIGAIFP 300
  301 AMAYAVMALR VLGCGEGDPD YIRGLQAIDD LLQHRTPQEA DPPRTDGTCI DSGMSAAFAL 360
  361 TPSAHAAADG TGSSSICQPC NSPIWDTCLS LSALMEAGMP ASHPAATQAV EWLLSQQILS 420
  421 PGDWSLKVPD LEGGGWAFQF ENTLYPDLDD TSKVIMSLLR AGALENERYR DRIARGVNWV 480
  481 LGMQSSDGGW AAFDIDNNYH YLNDIPFADH GALLDPSTSD LTGRCIELLS MVGFDRTFPP 540
  541 IARGIGFLRS EQEENGAWFG RWGVNYIYGT WSVLSGLRQA GEDMQQPYIR KAVGWLASCQ 600
  601 NHDGGWGETC YSYDDPSLAG KGASTPSQTA WSLLGLMAAG EVNSLAVRRG VRYLLDHQNQ 660
  661 WGTWEEKHFT GTGFPRVFYL RYHGYRHFFP LWALGVYSRL SSGQKACQDE RRHASPGDLH 720
  721 LPWLERIKKR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle