YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39985088, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRALWTAAS GMQAQQTNID VVANNLANVN TAGFKKSRAD FQDLMYQNLK TSGAPSTSST  60
   61 QVPSGIQIGL GAKLAAVTKL FSEGNINQTG NELDIAIEGD GFFQIQMPDG TTTYSRAGSF 120
  121 KRDDQGRVVT SDGYPMLPEL VVPSNATSIS VGNDGTVSVT QAGQTSPTNI GNIQLATFSN 180
  181 PSGLTALGRN LFQESDSSGT PTTGTPGQNG IGTLAQGFLE MSNVSVMEEM VNMIVGQRAY 240
  241 EVNSKAVQAA DEMLQQANNL RR

Type	Start	End	Confidence
Signal Peptide	1	14	0.72
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	262	0.99