YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39985087, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGKQLAKGW SVMRAAAMAL IACMMCIGVA FATTGTQVVK EAGIRAVVAE YVRERTAGLG  60
   61 VETEIRKMAP IGDLKLPAGT VSYEVQAPRS WEGWGRANLA LIVRVDDRVQ RNIPVTVDVE 120
  121 ALADAVVAAH PLARGDIITS DDVTVQKRDI SSVNGRVYRS IDEVVGKRVK NAVRANTPLS 180
  181 GASIEKVPLV KSGQLVTIIA ESPALRLTAT GKARGNGAEG DIIKVQNMGS LKEIPARVID 240
  241 VGTVQVDF

Type	Start	End	Confidence
Signal Peptide	1	32	0.87
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	248	0.99