YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39997893, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFSCEPAEL RSRAKAAFIG LAVGDALGAP VEFMTTGEIK AKHGVLREIV GGGWLRLKPG  60
   61 QVTDDTDMSL CVARGVAKAG EWNLTAIAEE FAAWLRSKPV DVGDTCRRGI RNYMLKGLLE 120
  121 TPFNQWDAGN GAAMRMLPTA LFTMGDDNLL CRCAVEQGHL THNHPLSDAA CITLGRLVHL 180
  181 SVLGFSKPRL RREADRLTES HPTFSFEPYR GLATGYVVDT MQTVLHFFFR GRDFEECLVS 240
  241 TVNQGGDADT TGAIIGMVAG AYYGMEEIPR RWLKKMDRQV LDEIDTLSDL LISLSPALRS 300
  301 GNGILLPPA

Type	Start	End	Confidence
Signal Peptide	1	28	0.71
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	309	0.98